Phylogenetic and Population Analyses on P1, HC-Pro, and P3 of Potato Virus Y Isolates Infecting Potato in the Central Region of Türkiye
Yazarlar (3)
Doç. Dr. Şerife TOPKAYA Tokat Gaziosmanpaşa Üniversitesi, Türkiye
Adyatma Irawan Santosa Universitas Gadjah Mada, Endonezya
Ali Çelik Bolu Abant İzzet Baysal Üniversitesi, Türkiye
Makale Türü Özgün Makale (SSCI, AHCI, SCI, SCI-Exp dergilerinde yayınlanan tam makale)
Dergi Adı Potato Research (Q1)
Dergi ISSN 0014-3065 Dergi Bilgileri (2025)
Dergi Tarandığı Indeksler SCI-Expanded
Makale Dili İngilizce Basım Tarihi 12-2025
Cilt / Sayı / Sayfa 68 / 4 / 4733–4747 DOI 10.1007/s11540-025-09938-x
Makale Linki https://link.springer.com/article/10.1007/s11540-025-09938-x
UAK Araştırma Alanları
Fitopatoloji Viroloji
Özet
Potato virus Y (PVY) has been reported as one of the pathogens hampering production of potato (Solanum tuberosum L.) in Türkiye, but the genetic diversity of Turkish isolates is still largely unknown. Four hundred and forty-seven samples from Afyon, Bolu, Nevşehir, and Tokat Provinces in the central region of Türkiye, where most of the country’s cultivation is performed, were molecularly tested for PVY in this study. Sequences of partial P1, complete HC-Pro, and complete P3 gene regions (concatenated length of 3258 nt) were obtained for 25 of 197 (44.07%) positive tested isolates, randomly selected to represent each province. Twenty-two Turkish isolates were positioned in N group while three other Turkish isolates, including two recombinant isolates (S9-10 and Sa12-8), were included in NTN group in the constructed phylogenetic tree. Members of the recombinant NTN group were shown to have high diversity …
Anahtar Kelimeler
Gene flow | Genetic differentiation | Plant viral disease | Population structure | RT-PCR